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  5. LOC_Os11g13760

LOC_Os11g13760


Description : retrotransposon protein, putative, unclassified


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os11g13760
Cluster HCCA clusters: cluster_0058

Target Alias Description ECC score Gene Family Method Actions
Bradi1g45514 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi1g57831 No alias RNA-directed DNA polymerase (reverse... 0.04 Orthogroups_2024-Update
HORVU1Hr1G059830.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G048790.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G040770.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G042750.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G008600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!