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  5. LOC_Os12g08770

LOC_Os12g08770


Description : photosystem I reaction center subunit N, chloroplast precursor, putative, expressed


Gene families : OG_42_0007070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007070_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os12g08770
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
At5g64040 No alias Photosystem I reaction center subunit PSI-N,... 0.03 Orthogroups_2024-Update
Bradi4g40780 No alias photosystem I reaction center subunit PSI-N,... 0.03 Orthogroups_2024-Update
Brara.B03879.1 No alias component *(PsaN) of PS-I complex 0.03 Orthogroups_2024-Update
Brara.F02286.1 No alias component *(PsaN) of PS-I complex 0.03 Orthogroups_2024-Update
Brara.I00765.1 No alias component *(PsaN) of PS-I complex 0.03 Orthogroups_2024-Update
Cre02.g082500 No alias photosystem I reaction center subunit PSI-N,... 0.02 Orthogroups_2024-Update
Glyma.06G150300 No alias photosystem I reaction center subunit PSI-N,... 0.03 Orthogroups_2024-Update
Kfl00036_0310 kfl00036_0310_v1.1 (p31093|psan_horvu : 108.0) Photosystem I reaction... 0.02 Orthogroups_2024-Update
MA_348255g0010 No alias (o65107|psan_maize : 125.0) Photosystem I reaction... 0.04 Orthogroups_2024-Update
Mp4g20410.1 No alias component PsaN of PS-I complex 0.03 Orthogroups_2024-Update
Potri.005G063300 No alias photosystem I reaction center subunit PSI-N,... 0.04 Orthogroups_2024-Update
Seita.7G279400.1 No alias component *(PsaN) of PS-I complex 0.05 Orthogroups_2024-Update
Sobic.008G063500.1 No alias component *(PsaN) of PS-I complex 0.06 Orthogroups_2024-Update
Solyc08g013670 No alias photosystem I reaction center subunit 0.04 Orthogroups_2024-Update
Sopen08g004510 No alias Photosystem I reaction centre subunit N (PSAN or PSI-N) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR008796 PSAN 25 149
No external refs found!