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  5. LOC_Os12g29350

LOC_Os12g29350


Description : ATP binding protein, putative, expressed


Gene families : OG_42_0002268 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g29350
Cluster HCCA clusters: cluster_0068

Target Alias Description ECC score Gene Family Method Actions
At3g28020 No alias DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:F4IXT2] 0.02 Orthogroups_2024-Update
Seita.8G131600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G124500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g097670 No alias ATP/DNA binding protein (AHRD V3.3 *** AT3G48770.2) 0.03 Orthogroups_2024-Update
Sopen03g028420 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!