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LOC_Os12g34874


Description : bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed


Gene families : OG_42_0002802 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002802_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os12g34874
Cluster HCCA clusters: cluster_0099

Target Alias Description ECC score Gene Family Method Actions
Glyma.19G239800 No alias dehydroquinate dehydratase, putative / shikimate... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA InterProScan predictions
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 258 338
IPR001381 DHquinase_I 23 244
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 377 448
No external refs found!