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  5. LOC_Os12g43130

LOC_Os12g43130


Description : phytoene synthase, chloroplast precursor, putative, expressed


Gene families : OG_42_0001912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g43130
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
A4A49_15187 No alias bifunctional 15-cis-phytoene synthase, chromoplastic 0.02 Orthogroups_2024-Update
Bradi1g29590 No alias PHYTOENE SYNTHASE 0.02 Orthogroups_2024-Update
Bradi4g01100 No alias PHYTOENE SYNTHASE 0.05 Orthogroups_2024-Update
Brara.B00699.1 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.02 Orthogroups_2024-Update
Glyma.02G240200 No alias PHYTOENE SYNTHASE 0.05 Orthogroups_2024-Update
Glyma.02G283400 No alias PHYTOENE SYNTHASE 0.06 Orthogroups_2024-Update
Glyma.08G306200 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Glyma.14G031200 No alias PHYTOENE SYNTHASE 0.05 Orthogroups_2024-Update
Glyma.14G209700 No alias PHYTOENE SYNTHASE 0.04 Orthogroups_2024-Update
Mp2g21100.1 No alias phytoene synthase (PSY) 0.02 Orthogroups_2024-Update
PSME_00007591-RA No alias (p37272|psy_capan : 426.0) Phytoene synthase,... 0.02 Orthogroups_2024-Update
Potri.005G205800 No alias PHYTOENE SYNTHASE 0.02 Orthogroups_2024-Update
Pp1s323_70V6 No alias phytoene synthase 0.04 Orthogroups_2024-Update
Seita.3G397800.1 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.02 Orthogroups_2024-Update
Sobic.008G180800.1 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.04 Orthogroups_2024-Update
Solyc02g081330 No alias phytoene synthase 2 0.06 Orthogroups_2024-Update
Solyc03g031860 No alias Phytoene synthase 1 0.03 Orthogroups_2024-Update
Sopen02g025960 No alias Squalene/phytoene synthase 0.04 Orthogroups_2024-Update
evm.model.tig00001093.21 No alias (p49085|psy_maize : 308.0) Phytoene synthase,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!