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  5. LOC_Os12g43720

LOC_Os12g43720


Description : early-responsive to dehydration protein-related, putative, expressed


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os12g43720
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
A4A49_09861 No alias csc1-like protein rxw8 0.05 Orthogroups_2024-Update
A4A49_29826 No alias csc1-like protein rxw8 0.03 Orthogroups_2024-Update
At1g69450 No alias Early-responsive to dehydration stress protein (ERD4)... 0.04 Orthogroups_2024-Update
At4g15430 No alias CSC1-like protein At4g15430... 0.03 Orthogroups_2024-Update
Bradi2g26180 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Orthogroups_2024-Update
Bradi4g00860 No alias lipases;hydrolases, acting on ester bonds 0.06 Orthogroups_2024-Update
Brara.A01995.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Brara.C02721.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Brara.H00598.1 No alias calcium-permeable channel *(OSCA) 0.06 Orthogroups_2024-Update
Brara.H01892.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.03 Orthogroups_2024-Update
Glyma.17G232235 No alias lipases;hydrolases, acting on ester bonds 0.03 Orthogroups_2024-Update
HORVU1Hr1G004230.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
HORVU1Hr1G051200.12 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Kfl00319_0100 kfl00319_0100_v1.1 (at1g11960 : 547.0) ERD (early-responsive to dehydration... 0.02 Orthogroups_2024-Update
MA_158173g0010 No alias (at1g30360 : 759.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
MA_99251g0010 No alias (at1g30360 : 376.0) early-responsive to dehydration 4... 0.03 Orthogroups_2024-Update
PSME_00002534-RA No alias (at1g30360 : 781.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
Pp1s322_34V6 No alias early-responsive to dehydration erd 0.02 Orthogroups_2024-Update
Pp1s96_240V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Seita.3G120200.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
Seita.3G403000.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Sobic.008G187100.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Sobic.009G258100.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Solyc06g084330 No alias ERD (early-responsive to dehydration stress) family... 0.02 Orthogroups_2024-Update
Solyc12g088230 No alias mitochondrial malate dehydrogenase 0.03 Orthogroups_2024-Update
evm.model.tig00000227.25 No alias (at1g30360 : 154.0) early-responsive to dehydration 4... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 186 344
IPR032880 Csc1_N 6 163
IPR003864 RSN1_7TM 355 621
No external refs found!