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  5. Cre02.g086650

Cre02.g086650


Description : structural maintenance of chromosomes 2


Gene families : OG_42_0005833 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre02.g086650
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
137981 No alias Structural maintenance of chromosomes (SMC) family protein 0.02 Orthogroups_2024-Update
A4A49_06471 No alias structural maintenance of chromosomes protein 2-1 0.02 Orthogroups_2024-Update
At5g62410 No alias Structural maintenance of chromosomes protein 2-1... 0.03 Orthogroups_2024-Update
Brara.F02117.1 No alias component *(CAP-E2/SMC2) of condensin I/II complex 0.02 Orthogroups_2024-Update
Glyma.12G236600 No alias structural maintenance of chromosomes 2 0.05 Orthogroups_2024-Update
Glyma.13G202100 No alias structural maintenance of chromosomes 2 0.06 Orthogroups_2024-Update
Kfl00001_0690 kfl00001_0690_v1.1 (at5g62410 : 1028.0) SMC2-1 (SMC2); structural... 0.05 Orthogroups_2024-Update
Pp1s52_57V6 No alias condensin complex components subunit 0.02 Orthogroups_2024-Update
Solyc03g093250 No alias Structural maintenance of chromosomes protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc03g093260 No alias Structural maintenance of chromosomes protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Sopen03g024050 No alias RecF/RecN/SMC N terminal domain 0.03 Orthogroups_2024-Update
evm.model.contig_575.3 No alias (at3g47460 : 681.0) member of SMC subfamily; ATSMC2;... 0.08 Orthogroups_2024-Update
evm.model.tig00000615.55 No alias (at5g62410 : 590.0) SMC2-1 (SMC2); structural... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0005694 chromosome IEA InterProScan predictions
BP GO:0051276 chromosome organization IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0000724 double-strand break repair via homologous recombination IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
CC GO:0000776 kinetochore IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR010935 SMC_hinge 517 635
IPR003395 RecF/RecN/SMC_N 2 1156
No external refs found!