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  5. Cre03.g199647

Cre03.g199647


Description : eukaryotic initiation factor 4A-III


Gene families : OG_42_0000623 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre03.g199647
Cluster HCCA clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
At1g51380 No alias DEAD-box ATP-dependent RNA helicase 34... 0.02 Orthogroups_2024-Update
Bradi3g60590 No alias eukaryotic initiation factor 4A-III 0.01 Orthogroups_2024-Update
Brara.G03149.1 No alias mRNA unwinding factor *(eIF4A)) 0.02 Orthogroups_2024-Update
GRMZM2G116034 No alias eukaryotic translation initiation factor 4A1 0.02 Orthogroups_2024-Update
Glyma.04G052900 No alias eukaryotic translation initiation factor 4A1 0.02 Orthogroups_2024-Update
Glyma.06G053200 No alias eukaryotic translation initiation factor 4A1 0.03 Orthogroups_2024-Update
Glyma.15G171800 No alias eukaryotic translation initiation factor 4A1 0.04 Orthogroups_2024-Update
Glyma.17G053200 No alias eif4a-2 0.02 Orthogroups_2024-Update
Mp4g09540.1 No alias helicase component eIF4A3 of RNA quality control Exon... 0.03 Orthogroups_2024-Update
PSME_00024625-RA No alias (p41380|if4a3_nicpl : 382.0) Eukaryotic initiation... 0.02 Orthogroups_2024-Update
PSME_00041551-RA No alias (q41741|if4a_maize : 513.0) Eukaryotic initiation factor... 0.03 Orthogroups_2024-Update
Potri.006G225700 No alias eukaryotic translation initiation factor 4A1 0.01 Orthogroups_2024-Update
Seita.1G089900.1 No alias mRNA unwinding factor *(eIF4A)) 0.01 Orthogroups_2024-Update
Seita.1G377900.1 No alias helicase component *(eIF4A3) of RNA quality control Exon... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 252 360
IPR011545 DEAD/DEAH_box_helicase_dom 51 213
No external refs found!