1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre06.g266416

Cre06.g266416


Description : RNA helicase family protein


Gene families : OG_42_0000651 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000651_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre06.g266416
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
At1g48650 No alias DEA(D/H)-box RNA helicase family protein... 0.02 Orthogroups_2024-Update
Bradi2g01360 No alias DEA(D/H)-box RNA helicase family protein 0.01 Orthogroups_2024-Update
Bradi5g10330 No alias RNA helicase family protein 0.03 Orthogroups_2024-Update
Kfl00017_0530 kfl00017_0530_v1.... (at2g35920 : 694.0) RNA helicase family protein;... 0.01 Orthogroups_2024-Update
MA_177779g0010 No alias (at2g35920 : 291.0) RNA helicase family protein;... 0.04 Orthogroups_2024-Update
Pp1s304_33V6 No alias atp-dependent rna 0.02 Orthogroups_2024-Update
Pp1s36_206V6 No alias atp-dependent rna 0.02 Orthogroups_2024-Update
Seita.9G092100.1 No alias group-I intron splicing RNA helicase *(ABO6) 0.02 Orthogroups_2024-Update
Seita.9G225800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g002590 No alias Helicase associated domain (HA2) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 559 648
IPR001650 Helicase_C 280 417
IPR011709 DUF1605 756 846
No external refs found!