Cre10.g425675

Description : Function unknown

Gene families : OG_42_0002498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002498_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Chlamydomonas release: Cre10.g425675
Cluster	HCCA clusters: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G145917	No alias	Function unknown	0.02	Orthogroups_2024-Update
Mp3g23360.1	No alias	NUP107 scaffold nucleoporin of nuclear pore complex	0.02	Orthogroups_2024-Update
Sobic.005G199200.1	No alias	scaffold nucleoporin of nuclear pore complex *(NUP107)	0.02	Orthogroups_2024-Update
Solyc12g049410	No alias	nuclear pore complex protein (AHRD V3.3 *** AT3G14120.2)	0.02	Orthogroups_2024-Update
Sopen12g023890	No alias	Nuclear pore protein 84 / 107	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	InterProScan predictions
MF	GO:0017056	structural constituent of nuclear pore	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predicted GO
CC	GO:0005667	transcription factor complex	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
MF	GO:0034450	ubiquitin-ubiquitin ligase activity	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007252	Nup84/Nup107	77	349

External Links

No external refs found!