Description : structural maintenance of chromosome 3
Gene families : OG_42_0006183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Chlamydomonas release: Cre12.g493400 | |
Cluster | HCCA clusters: Cluster_81 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g48600 | No alias | Structural maintenance of chromosomes protein... | 0.02 | Orthogroups_2024-Update | |
Glyma.13G062800 | No alias | structural maintenance of chromosome 3 | 0.03 | Orthogroups_2024-Update | |
Glyma.19G022800 | No alias | structural maintenance of chromosome 3 | 0.05 | Orthogroups_2024-Update | |
Kfl00411_0100 | kfl00411_0100_v1.1 | (at5g48600 : 1014.0) member of SMC subfamily; structural... | 0.05 | Orthogroups_2024-Update | |
Solyc02g087980 | No alias | Structural maintenance of chromosomes protein (AHRD V3.3... | 0.06 | Orthogroups_2024-Update | |
Sopen02g032720 | No alias | RecF/RecN/SMC N terminal domain | 0.06 | Orthogroups_2024-Update | |
evm.model.contig_3558.6 | No alias | (at5g48600 : 612.0) member of SMC subfamily; structural... | 0.09 | Orthogroups_2024-Update | |
evm.model.tig00000711.41 | No alias | (at5g48600 : 304.0) member of SMC subfamily; structural... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0005694 | chromosome | IEA | InterProScan predictions |
BP | GO:0051276 | chromosome organization | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predicted GO |
BP | GO:0000725 | recombinational repair | IEP | Predicted GO |
CC | GO:0000776 | kinetochore | IEP | Predicted GO |
CC | GO:0000796 | condensin complex | IEP | Predicted GO |
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006323 | DNA packaging | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
BP | GO:0007076 | mitotic chromosome condensation | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
BP | GO:0030261 | chromosome condensation | IEP | Predicted GO |
CC | GO:0031262 | Ndc80 complex | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
BP | GO:1903047 | mitotic cell cycle process | IEP | Predicted GO |
No external refs found! |