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  5. Cre13.g578100

Cre13.g578100


Description : Protein of unknown function (DUF3414)


Gene families : OG_42_0004816 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Chlamydomonas release: Cre13.g578100
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
At5g51200 No alias Protein of unknown function (DUF3414) [Source:TAIR;Acc:AT5G51200] 0.02 Orthogroups_2024-Update
LOC_Os02g10790 No alias expressed protein 0.02 Orthogroups_2024-Update
Mp6g01090.1 No alias NUP205 scaffold nucleoporin of nuclear pore complex 0.02 Orthogroups_2024-Update
PSME_00001656-RA No alias (at5g51200 : 331.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
Seita.1G044300.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) 0.04 Orthogroups_2024-Update
Sobic.004G085000.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP205) 0.01 Orthogroups_2024-Update
Solyc12g006480 No alias Nuclear pore complex Nup205-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen12g002420 No alias Protein of unknown function (DUF3414) 0.03 Orthogroups_2024-Update
evm.model.tig00000880.31 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015105 arsenite transmembrane transporter activity IEP Predicted GO
BP GO:0015700 arsenite transport IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR021827 Nup186/Nup192/Nup205 487 927
IPR021827 Nup186/Nup192/Nup205 3 168
IPR021827 Nup186/Nup192/Nup205 1049 1799
No external refs found!