1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10427917g0010

MA_10427917g0010


Description : (at3g02080 : 247.0) Ribosomal protein S19e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S19e, conserved site (InterPro:IPR018277), Ribosomal protein S19e (InterPro:IPR001266); BEST Arabidopsis thaliana protein match is: Ribosomal protein S19e family protein (TAIR:AT5G15520.1); Has 1131 Blast hits to 1131 proteins in 394 species: Archae - 214; Bacteria - 4; Metazoa - 402; Fungi - 148; Plants - 164; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). & (p40978|rs19_orysa : 235.0) 40S ribosomal protein S19 - Oryza sativa (Rice) & (reliability: 494.0) & (original description: no original description)


Gene families : OG_42_0001908 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001908_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10427917g0010
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
153225 No alias Ribosomal protein S19e family protein 0.09 Orthogroups_2024-Update
A4A49_38035 No alias 40s ribosomal protein s19-3 0.09 Orthogroups_2024-Update
A4A49_60647 No alias 40s ribosomal protein s19-3 0.06 Orthogroups_2024-Update
Bradi3g56527 No alias Ribosomal protein S19e family protein 0.05 Orthogroups_2024-Update
Bradi4g08690 No alias Ribosomal protein S19e family protein 0.04 Orthogroups_2024-Update
Brara.A03915.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.C02969.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.C04231.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Brara.E03604.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.I00650.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre02.g106600 No alias Ribosomal protein S19e family protein 0.11 Orthogroups_2024-Update
Glyma.04G132900 No alias Ribosomal protein S19e family protein 0.06 Orthogroups_2024-Update
Glyma.11G158500 No alias Ribosomal protein S19e family protein 0.05 Orthogroups_2024-Update
Glyma.13G057500 No alias Ribosomal protein S19e family protein 0.08 Orthogroups_2024-Update
Glyma.19G028700 No alias Ribosomal protein S19e family protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G052240.6 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Kfl00035_0260 kfl00035_0260_v1.1 (at3g02080 : 166.0) Ribosomal protein S19e family... 0.02 Orthogroups_2024-Update
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.07 Orthogroups_2024-Update
PSME_00007653-RA No alias (at5g15520 : 237.0) Ribosomal protein S19e family... 0.12 Orthogroups_2024-Update
Potri.015G056100 No alias Ribosomal protein S19e family protein 0.04 Orthogroups_2024-Update
Potri.017G092200 No alias Ribosomal protein S19e family protein 0.04 Orthogroups_2024-Update
Pp1s21_363V6 No alias 40s ribosomal protein s19 0.17 Orthogroups_2024-Update
Pp1s34_111V6 No alias 40s ribosomal protein s19 0.16 Orthogroups_2024-Update
Pp1s54_217V6 No alias 40s ribosomal protein s19 0.11 Orthogroups_2024-Update
Pp1s84_153V6 No alias 40s ribosomal protein s19 0.13 Orthogroups_2024-Update
Pp1s98_182V6 No alias 40s ribosomal protein s19 0.08 Orthogroups_2024-Update
Seita.2G151200.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Seita.9G361400.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Seita.9G575800.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sobic.001G334300.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.007G178600.1 No alias component *(eS19) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Solyc03g115360 No alias 40S ribosomal protein S19-like (AHRD V3.3 *** Q2VCJ6_SOLTU) 0.08 Orthogroups_2024-Update
Solyc12g039120 No alias 40S ribosomal protein S19-like (AHRD V3.3 *** Q2VCJ6_SOLTU) 0.07 Orthogroups_2024-Update
Sopen03g034360 No alias Ribosomal protein S19e 0.09 Orthogroups_2024-Update
Sopen12g019420 No alias Ribosomal protein S19e 0.11 Orthogroups_2024-Update
evm.model.contig_3407.10 No alias (at3g02080 : 155.0) Ribosomal protein S19e family... 0.15 Orthogroups_2024-Update
evm.model.tig00021017.6 No alias (at3g02080 : 183.0) Ribosomal protein S19e family... 0.14 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 6 140
No external refs found!