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  5. Solyc10g009020

Solyc10g009020


Description : RING finger protein (AHRD V3.3 *** A0A0B0PIZ1_GOSAR)


Gene families : OG_42_0000680 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g009020
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
270353 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
At1g24440 No alias F21J9.10 [Source:UniProtKB/TrEMBL;Acc:Q9FYL9] 0.03 Orthogroups_2024-Update
HORVU2Hr1G118590.11 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os04g58320 No alias zinc finger, RING-type, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g17400 No alias zinc finger, RING-type, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s47_230V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.02 Orthogroups_2024-Update
Solyc02g078460 No alias abscisic acid-insensitive RING protein 4-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!