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  5. MA_128814g0010

MA_128814g0010


Description : (at1g56580 : 100.0) Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number.; SMALLER WITH VARIABLE BRANCHES (SVB); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT1G09310.1); Has 365 Blast hits to 365 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 365; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 200.0) & (original description: no original description)


Gene families : OG_42_0000291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_128814g0010
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
At4g24130 No alias T19F6.7 protein [Source:UniProtKB/TrEMBL;Acc:O22978] 0.04 Orthogroups_2024-Update
MA_9395g0010 No alias (at4g24130 : 108.0) Protein of unknown function, DUF538;... 0.04 Orthogroups_2024-Update
Seita.9G190900.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 3 94
No external refs found!