1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_20563g0010

MA_20563g0010


Description : (at3g60860 : 849.0) SEC7-like guanine nucleotide exchange family protein; FUNCTIONS IN: binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity; INVOLVED IN: regulation of ARF protein signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1); Has 2962 Blast hits to 2694 proteins in 246 species: Archae - 0; Bacteria - 33; Metazoa - 1475; Fungi - 672; Plants - 315; Viruses - 0; Other Eukaryotes - 467 (source: NCBI BLink). & (reliability: 1698.0) & (original description: no original description)


Gene families : OG_42_0000974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_20563g0010
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Bradi1g24597 No alias HOPM interactor 7 0.02 Orthogroups_2024-Update
Bradi1g35770 No alias SEC7-like guanine nucleotide exchange family protein 0.04 Orthogroups_2024-Update
Bradi1g68180 No alias SEC7-like guanine nucleotide exchange family protein 0.04 Orthogroups_2024-Update
Cre09.g390319 No alias SEC7-like guanine nucleotide exchange family protein 0.02 Orthogroups_2024-Update
Glyma.02G312200 No alias SEC7-like guanine nucleotide exchange family protein 0.05 Orthogroups_2024-Update
Glyma.09G268400 No alias SEC7-like guanine nucleotide exchange family protein 0.06 Orthogroups_2024-Update Find specific profiles
  • Co-expression Networks
  • Create custom network
  • Find enriched clusters
    		•
    Glyma.17G044000 No alias HOPM interactor 7 0.04 Orthogroups_2024-Update
    Kfl00174_0120 kfl00174_0120_v1.1 (at3g43300 : 1318.0) AtMIN7 is an immunity associated... 0.07 Orthogroups_2024-Update
    Kfl00714_0050 kfl00714_0050_v1.1 (at3g60860 : 1621.0) SEC7-like guanine nucleotide... 0.07 Orthogroups_2024-Update
    LOC_Os07g37750 No alias ATMIN7, putative, expressed 0.03 Orthogroups_2024-Update
    Mp7g11590.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Orthogroups_2024-Update
    Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Orthogroups_2024-Update
    PSME_00004672-RA No alias (at3g43300 : 1546.0) AtMIN7 is an immunity associated... 0.03 Orthogroups_2024-Update
    PSME_00031685-RA No alias (at3g60860 : 2385.0) SEC7-like guanine nucleotide... 0.05 Orthogroups_2024-Update
    Pp1s19_33V6 No alias guanine nucleotide- 0.03 Orthogroups_2024-Update
    Pp1s264_74V6 No alias T4C21.270; guanine nucleotide exchange family protein... 0.04 Orthogroups_2024-Update
    Seita.2G354300.1 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.04 Orthogroups_2024-Update
    Seita.9G470100.1 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.04 Orthogroups_2024-Update
    Sobic.001G437400.1 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.02 Orthogroups_2024-Update
    Sobic.002G340900.1 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.03 Orthogroups_2024-Update
    Sobic.010G195000.1 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) 0.02 Orthogroups_2024-Update
    Solyc01g112350 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.03 Orthogroups_2024-Update
    evm.model.tig00000852.23 No alias (at3g43300 : 543.0) AtMIN7 is an immunity associated... 0.03 Orthogroups_2024-Update

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source
    CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
    CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
    MF GO:0000166 nucleotide binding IEP Predicted GO
    BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
    MF GO:0001882 nucleoside binding IEP Predicted GO
    MF GO:0001883 purine nucleoside binding IEP Predicted GO
    MF GO:0003712 transcription coregulator activity IEP Predicted GO
    MF GO:0003714 transcription corepressor activity IEP Predicted GO
    MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
    MF GO:0003924 GTPase activity IEP Predicted GO
    MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
    MF GO:0005524 ATP binding IEP Predicted GO
    MF GO:0005525 GTP binding IEP Predicted GO
    CC GO:0005575 cellular_component IEP Predicted GO
    CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
    BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
    BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
    BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
    BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
    BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
    BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
    BP GO:0006886 intracellular protein transport IEP Predicted GO
    CC GO:0008023 transcription elongation factor complex IEP Predicted GO
    BP GO:0008104 protein localization IEP Predicted GO
    MF GO:0008144 drug binding IEP Predicted GO
    MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
    MF GO:0008536 Ran GTPase binding IEP Predicted GO
    MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
    BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
    BP GO:0009250 glucan biosynthetic process IEP Predicted GO
    BP GO:0015031 protein transport IEP Predicted GO
    BP GO:0015833 peptide transport IEP Predicted GO
    BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
    BP GO:0016192 vesicle-mediated transport IEP Predicted GO
    MF GO:0016462 pyrophosphatase activity IEP Predicted GO
    BP GO:0016569 covalent chromatin modification IEP Predicted GO
    BP GO:0016570 histone modification IEP Predicted GO
    CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
    MF GO:0016740 transferase activity IEP Predicted GO
    MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
    MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
    MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
    MF GO:0016887 ATPase activity IEP Predicted GO
    MF GO:0017016 Ras GTPase binding IEP Predicted GO
    MF GO:0017076 purine nucleotide binding IEP Predicted GO
    MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
    MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
    MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
    CC GO:0030117 membrane coat IEP Predicted GO
    CC GO:0030120 vesicle coat IEP Predicted GO
    CC GO:0030126 COPI vesicle coat IEP Predicted GO
    MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
    MF GO:0031267 small GTPase binding IEP Predicted GO
    MF GO:0032549 ribonucleoside binding IEP Predicted GO
    MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
    MF GO:0032553 ribonucleotide binding IEP Predicted GO
    MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
    MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
    MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
    BP GO:0032774 RNA biosynthetic process IEP Predicted GO
    CC GO:0032991 protein-containing complex IEP Predicted GO
    BP GO:0033036 macromolecule localization IEP Predicted GO
    BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
    MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
    BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
    BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
    MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
    MF GO:0036094 small molecule binding IEP Predicted GO
    BP GO:0042886 amide transport IEP Predicted GO
    MF GO:0043168 anion binding IEP Predicted GO
    BP GO:0044042 glucan metabolic process IEP Predicted GO
    BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
    BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
    CC GO:0044422 organelle part IEP Predicted GO
    CC GO:0044424 intracellular part IEP Predicted GO
    CC GO:0044425 membrane part IEP Predicted GO
    CC GO:0044431 Golgi apparatus part IEP Predicted GO
    CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
    CC GO:0044444 cytoplasmic part IEP Predicted GO
    CC GO:0044446 intracellular organelle part IEP Predicted GO
    CC GO:0044459 plasma membrane part IEP Predicted GO
    CC GO:0044464 cell part IEP Predicted GO
    BP GO:0045184 establishment of protein localization IEP Predicted GO
    BP GO:0046907 intracellular transport IEP Predicted GO
    MF GO:0051020 GTPase binding IEP Predicted GO
    BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
    BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
    BP GO:0051641 cellular localization IEP Predicted GO
    BP GO:0051649 establishment of localization in cell IEP Predicted GO
    MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
    MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
    BP GO:0071702 organic substance transport IEP Predicted GO
    BP GO:0071705 nitrogen compound transport IEP Predicted GO
    BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
    MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
    CC GO:0098796 membrane protein complex IEP Predicted GO
    CC GO:0098797 plasma membrane protein complex IEP Predicted GO
    MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
    MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
    CC GO:1902494 catalytic complex IEP Predicted GO
    CC GO:1990234 transferase complex IEP Predicted GO
    InterPro domains Description Start Stop
    IPR032817 Mon2_C 233 309
    IPR015403 Sec7_C 69 151
    No external refs found!