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  5. Solyc10g079280

Solyc10g079280


Description : Nucleotide-sugar transporter family protein (AHRD V3.3 *** AT5G04160.1)


Gene families : OG_42_0001017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g079280
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G335000 No alias Nucleotide-sugar transporter family protein 0.03 Orthogroups_2024-Update
PSME_00044489-RA No alias (at3g11320 : 396.0) Nucleotide-sugar transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0042162 telomeric DNA binding IEP Predicted GO
MF GO:0043047 single-stranded telomeric DNA binding IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004853 Sugar_P_trans_dom 13 302
No external refs found!