Description : (at5g24930 : 245.0) CONSTANS-like 4 (COL4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 3 (TAIR:AT2G24790.1); Has 3148 Blast hits to 2480 proteins in 140 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 0; Plants - 2958; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 448.0) & (original description: no original description)
Gene families : OG_42_0000725 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_7292g0010 | |
Cluster | HCCA clusters: Cluster_103 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_38110 | No alias | zinc finger protein constans-like 2 | 0.04 | Orthogroups_2024-Update | |
At5g24930 | No alias | Zinc finger protein CONSTANS-LIKE 4... | 0.02 | Orthogroups_2024-Update | |
At5g57660 | No alias | Zinc finger protein CONSTANS-LIKE 5... | 0.04 | Orthogroups_2024-Update | |
Bradi5g14600 | No alias | CONSTANS-like 3 | 0.03 | Orthogroups_2024-Update | |
Brara.B01196.1 | No alias | floral promoter *(CONSTANS) & BBX class-I transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.D01502.1 | No alias | floral promoter *(CONSTANS) & BBX class-I transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.J01176.1 | No alias | floral promoter *(CONSTANS) & BBX class-I transcription factor | 0.03 | Orthogroups_2024-Update | |
Glyma.04G058900 | No alias | CONSTANS-like 4 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G093800 | No alias | CONSTANS-like 5 | 0.03 | Orthogroups_2024-Update | |
Kfl00103_0190 | kfl00103_0190_v1.... | (at5g24930 : 204.0) CONSTANS-like 4 (COL4); FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
LOC_Os09g06464 | No alias | CCT/B-box zinc finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Pp1s364_5V6 | No alias | col3 gene for putative COSTANS-like 3 protein COL3 | 0.02 | Orthogroups_2024-Update | |
Pp1s371_27V6 | No alias | col1 gene for putative CONSTANS-like 1 protein COL1 | 0.02 | Orthogroups_2024-Update | |
Pp1s97_109V6 | No alias | col2 gene for putative CONSTANS-like 2 protein COL2 | 0.03 | Orthogroups_2024-Update | |
Seita.1G228800.1 | No alias | floral promoter *(CONSTANS) & BBX class-I transcription factor | 0.04 | Orthogroups_2024-Update | |
Sobic.004G063200.1 | No alias | floral promoter *(CONSTANS) & BBX class-I transcription factor | 0.04 | Orthogroups_2024-Update | |
Sobic.006G135100.1 | No alias | floral promoter *(CONSTANS) & BBX class-I transcription factor | 0.03 | Orthogroups_2024-Update | |
Solyc02g089540 | No alias | CONSTANS 1 | 0.03 | Orthogroups_2024-Update | |
Solyc07g006630 | No alias | CONSTANS-like protein (AHRD V3.3 *** B2MW87_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Sopen07g002740 | No alias | CCT motif | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predicted GO |
MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0007050 | cell cycle arrest | IEP | Predicted GO |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009522 | photosystem I | IEP | Predicted GO |
CC | GO:0009523 | photosystem II | IEP | Predicted GO |
CC | GO:0009538 | photosystem I reaction center | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
BP | GO:0010109 | regulation of photosynthesis | IEP | Predicted GO |
BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
MF | GO:0010242 | oxygen evolving activity | IEP | Predicted GO |
BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
MF | GO:0019210 | kinase inhibitor activity | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0030145 | manganese ion binding | IEP | Predicted GO |
MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Predicted GO |
BP | GO:0042549 | photosystem II stabilization | IEP | Predicted GO |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
BP | GO:0048523 | negative regulation of cellular process | IEP | Predicted GO |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
No external refs found! |