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  5. MA_7331g0010

MA_7331g0010


Description : (at3g02850 : 965.0) Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.; STELAR K+ outward rectifier (SKOR); FUNCTIONS IN: outward rectifier potassium channel activity, cyclic nucleotide binding; INVOLVED IN: potassium ion transport, response to abscisic acid stimulus; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Protein of unknown function DUF3354 (InterPro:IPR021789), Ankyrin repeat-containing domain (InterPro:IPR020683), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: gated outwardly-rectifying K+ channel (TAIR:AT5G37500.1); Has 82938 Blast hits to 34972 proteins in 1815 species: Archae - 147; Bacteria - 10317; Metazoa - 39460; Fungi - 7131; Plants - 3765; Viruses - 1138; Other Eukaryotes - 20980 (source: NCBI BLink). & (q8vyx2|akt1_orysa : 362.0) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 1930.0) & (original description: no original description)


Gene families : OG_42_0000182 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_7331g0010
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
A4A49_13640 No alias potassium channel skor 0.03 Orthogroups_2024-Update
Kfl00373_0010 kfl00373_0010_v1.1 (at5g37500 : 281.0) Encodes a guard cell outward... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 78 324
IPR021789 KHA_dom 773 839
IPR000595 cNMP-bd_dom 419 503
IPR020683 Ankyrin_rpt-contain_dom 551 639
IPR020683 Ankyrin_rpt-contain_dom 648 726
No external refs found!