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MA_742g0010


Description : (at3g23330 : 522.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1); Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0; Bacteria - 10; Metazoa - 50; Fungi - 109; Plants - 37267; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink). & (q76c99|rf1_orysa : 122.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1044.0) & (original description: no original description)


Gene families : OG_42_0013853 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013853_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_742g0010
Cluster HCCA clusters: Cluster_7


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 282 306
IPR002885 Pentatricopeptide_repeat 49 75
IPR002885 Pentatricopeptide_repeat 382 407
IPR002885 Pentatricopeptide_repeat 77 102
IPR002885 Pentatricopeptide_repeat 105 153
IPR002885 Pentatricopeptide_repeat 308 356
IPR002885 Pentatricopeptide_repeat 207 254
IPR032867 DYW_dom 481 592
No external refs found!