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Description : (at5g17020 : 798.0) Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes.; exportin 1A (XPO1A); CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), Exportin 1, C-terminal (InterPro:IPR014877), Armadillo-like helical (InterPro:IPR011989), Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: exportin 1B (TAIR:AT3G03110.1). & (reliability: 1596.0) & (original description: no original description)
Gene families : OG_42_0003485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003485_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_88625g0010 | |
| Cluster | HCCA clusters: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 233936 | No alias | exportin 1A | 0.02 | Orthogroups_2024-Update | |
| At5g17020 | No alias | XPO1A [Source:UniProtKB/TrEMBL;Acc:A0A178U9W2] | 0.02 | Orthogroups_2024-Update | |
| Bradi1g00887 | No alias | exportin 1A | 0.04 | Orthogroups_2024-Update | |
| Pp1s257_34V6 | No alias | 1 homolog | 0.04 | Orthogroups_2024-Update | |
| Seita.9G003700.1 | No alias | export karyopherin *(XPO1) of RNA-induced silencing... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005049 | nuclear export signal receptor activity | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0043531 | ADP binding | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014877 | XPO1_C_dom | 144 | 466 |
| No external refs found! |