MA_97627g0010

Description : (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding protein subunit beta, chloroplast precursor (60 kDa chaperonin subunit beta) (CPN-60 beta) - Pisum sativum (Garden pea) & (at3g13470 : 641.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding, protein refolding, cellular protein metabolic process; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperonin Cpn60, conserved site (InterPro:IPR018370), Chaperonin Cpn60 (InterPro:IPR001844); BEST Arabidopsis thaliana protein match is: chaperonin 60 beta (TAIR:AT1G55490.2); Has 34219 Blast hits to 34175 proteins in 8725 species: Archae - 803; Bacteria - 21843; Metazoa - 1743; Fungi - 1612; Plants - 836; Viruses - 2; Other Eukaryotes - 7380 (source: NCBI BLink). & (reliability: 1282.0) & (original description: no original description)

Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_97627g0010
Cluster	HCCA clusters: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
168153	No alias	chaperonin 60 beta	0.02	Orthogroups_2024-Update
A4A49_39526	No alias	chaperonin 60 subunit beta 4, chloroplastic	0.03	Orthogroups_2024-Update
AC215201.3_FG005	No alias	chaperonin-60alpha	0.02	Orthogroups_2024-Update
At2g28000	No alias	SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6]	0.03	Orthogroups_2024-Update
At3g13470	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.03	Orthogroups_2024-Update
At5g18820	No alias	Chaperonin 60 subunit alpha 2, chloroplastic...	0.03	Orthogroups_2024-Update
Bradi1g50270	No alias	chaperonin 60 beta	0.05	Orthogroups_2024-Update
Bradi1g75520	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Bradi2g18260	No alias	heat shock protein 60-3A	0.02	Orthogroups_2024-Update
Bradi4g38090	No alias	TCP-1/cpn60 chaperonin family protein	0.02	Orthogroups_2024-Update
Bradi5g11240	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Orthogroups_2024-Update
Brara.G01341.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.03	Orthogroups_2024-Update
Cre04.g231222	No alias	chaperonin-60alpha	0.02	Orthogroups_2024-Update
Glyma.02G126300	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Orthogroups_2024-Update
Glyma.08G175900	No alias	TCP-1/cpn60 chaperonin family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G079910.6	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
HORVU2Hr1G007840.7	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.03	Orthogroups_2024-Update
HORVU2Hr1G077410.1	No alias	subunit beta of CPN60 assembly chaperone heterodimer &...	0.04	Orthogroups_2024-Update
HORVU4Hr1G078820.3	No alias	chaperone *(Hsp60)	0.03	Orthogroups_2024-Update
Kfl00113_0150	kfl00113_0150_v1.1	(p08926\|ruba_pea : 818.0) RuBisCO large subunit-binding...	0.02	Orthogroups_2024-Update
LOC_Os12g17910	No alias	T-complex protein, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00000058-RA	No alias	(at3g13470 : 709.0) TCP-1/cpn60 chaperonin family...	0.03	Orthogroups_2024-Update
Potri.003G173900	No alias	heat shock protein 60	0.03	Orthogroups_2024-Update
Potri.004G213400	No alias	chaperonin-60alpha	0.03	Orthogroups_2024-Update
Pp1s114_95V6	No alias	rubisco subunit binding-protein alpha subunit	0.03	Orthogroups_2024-Update
Pp1s149_289V6	No alias	-like atpase	0.03	Orthogroups_2024-Update
Pp1s16_322V6	No alias	rubisco subunit binding-protein alpha subunit	0.03	Orthogroups_2024-Update
Seita.2G129300.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.05	Orthogroups_2024-Update
Seita.3G283900.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.03	Orthogroups_2024-Update
Seita.4G010900.1	No alias	chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin...	0.04	Orthogroups_2024-Update
Sobic.002G131000.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.04	Orthogroups_2024-Update
Sobic.009G098100.1	No alias	subunit alpha of Cpn60 chaperonin complex & subunit...	0.04	Orthogroups_2024-Update
Sobic.009G214100.1	No alias	chaperone *(Hsp60)	0.02	Orthogroups_2024-Update
Solyc01g028810	No alias	Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)	0.04	Orthogroups_2024-Update
Solyc02g068730	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.02	Orthogroups_2024-Update
Solyc05g010240	No alias	Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU)	0.03	Orthogroups_2024-Update
Solyc11g069790	No alias	Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI)	0.04	Orthogroups_2024-Update
Sopen01g016850	No alias	TCP-1/cpn60 chaperonin family	0.02	Orthogroups_2024-Update
Sopen03g039670	No alias	TCP-1/cpn60 chaperonin family	0.03	Orthogroups_2024-Update
Sopen05g006000	No alias	TCP-1/cpn60 chaperonin family	0.04	Orthogroups_2024-Update
evm.model.contig_4417.1	No alias	(at2g28000 : 575.0) Encodes chaperonin-60 alpha, a...	0.02	Orthogroups_2024-Update
evm.model.contig_552.1	No alias	(q05046\|ch62_cucma : 684.0) Chaperonin CPN60-2,...	0.02	Orthogroups_2024-Update
evm.model.tig00001269.7	No alias	(q05046\|ch62_cucma : 728.0) Chaperonin CPN60-2,...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0005986	sucrose biosynthetic process	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006772	thiamine metabolic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
MF	GO:0008237	metallopeptidase activity	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0009228	thiamine biosynthetic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0050307	sucrose-phosphate phosphatase activity	IEP	Predicted GO
MF	GO:0050308	sugar-phosphatase activity	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO
MF	GO:0070569	uridylyltransferase activity	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	38	393
IPR002423	Cpn60/TCP-1	578	671

External Links

No external refs found!

MA_97627g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation