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  5. Pp1s117_86V6

Pp1s117_86V6


Description : 50s ribosomal protein l3


Gene families : OG_42_0007933 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007933_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s117_86V6
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Bradi3g03270 No alias Ribosomal protein L3 family protein 0.03 Orthogroups_2024-Update
Cre48.g761197 No alias Ribosomal protein L3 family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G018830.4 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
MA_10432831g0010 No alias (at2g43030 : 375.0) Ribosomal protein L3 family protein;... 0.03 Orthogroups_2024-Update
Potri.013G070100 No alias Ribosomal protein L3 family protein 0.03 Orthogroups_2024-Update
Seita.1G093900.1 No alias component *(uL3c) of large plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Solyc06g051200 No alias Ribosomal protein L3 family protein (AHRD V3.3 *** AT2G43030.1) 0.03 Orthogroups_2024-Update
Sopen06g017110 No alias Ribosomal protein L3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 182 259
No external refs found!