Solyc01g097870

Description : 40S ribosomal protein S24 (AHRD V3.3 *** K4B0H4_SOLLC)

Gene families : OG_42_0001483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001483_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc01g097870
Cluster	HCCA clusters: Cluster_249

Target	Alias	Description	ECC score	Gene Family Method
271584	No alias	Ribosomal protein S24e family protein	0.06	Orthogroups_2024-Update
A4A49_64768	No alias	40s ribosomal protein s24-1	0.06	Orthogroups_2024-Update
Bradi3g08680	No alias	Ribosomal protein S24e family protein	0.03	Orthogroups_2024-Update
Brara.B03525.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.E03413.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.F02892.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.I00438.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Cre10.g456200	No alias	Ribosomal protein S24e family protein	0.09	Orthogroups_2024-Update
GRMZM2G151252	No alias	Ribosomal protein S24e family protein	0.03	Orthogroups_2024-Update
GRMZM2G171426	No alias	Ribosomal protein S24e family protein	0.06	Orthogroups_2024-Update
Glyma.03G245300	No alias	Ribosomal protein S24e family protein	0.03	Orthogroups_2024-Update
Glyma.10G160300	No alias	Ribosomal protein S24e family protein	0.1	Orthogroups_2024-Update
Glyma.19G242700	No alias	Ribosomal protein S24e family protein	0.05	Orthogroups_2024-Update
Glyma.20G228100	No alias	Ribosomal protein S24e family protein	0.05	Orthogroups_2024-Update
Kfl00638_0040	kfl00638_0040_v1.1	(at3g04920 : 195.0) Ribosomal protein S24e family...	0.02	Orthogroups_2024-Update
MA_119841g0010	No alias	(at3g04920 : 158.0) Ribosomal protein S24e family...	0.03	Orthogroups_2024-Update
MA_119894g0010	No alias	(at3g04920 : 188.0) Ribosomal protein S24e family...	0.04	Orthogroups_2024-Update
Mp1g10680.1	No alias	component RPS24 of SSU proteome	0.03	Orthogroups_2024-Update
PSME_00005358-RA	No alias	(at3g04920 : 189.0) Ribosomal protein S24e family...	0.07	Orthogroups_2024-Update
PSME_00019619-RA	No alias	(at3g04920 : 187.0) Ribosomal protein S24e family...	0.04	Orthogroups_2024-Update
Potri.013G036100	No alias	Ribosomal protein S24e family protein	0.05	Orthogroups_2024-Update
Pp1s204_49V6	No alias	40s ribosomal protein	0.09	Orthogroups_2024-Update
Pp1s37_112V6	No alias	40s ribosomal protein	0.07	Orthogroups_2024-Update
Pp1s450_9V6	No alias	40s ribosomal protein	0.06	Orthogroups_2024-Update
Seita.1G028300.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Seita.4G181700.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.1	Orthogroups_2024-Update
Sobic.003G280700.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.09	Orthogroups_2024-Update
Sobic.004G099500.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Sobic.010G166100.1	No alias	component *(eS24) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Solyc06g084230	No alias	40S ribosomal protein S24 (AHRD V3.3 *** K4CUG0_SOLLC)	0.03	Orthogroups_2024-Update
Solyc09g065330	No alias	40S ribosomal protein S24 (AHRD V3.3 *** K4CAS8_SOLLC)	0.06	Orthogroups_2024-Update
Sopen01g041470	No alias	Ribosomal protein S24e	0.04	Orthogroups_2024-Update
Sopen09g027090	No alias	Ribosomal protein S24e	0.04	Orthogroups_2024-Update
evm.model.contig_2036.17	No alias	(at3g04920 : 137.0) Ribosomal protein S24e family...	0.11	Orthogroups_2024-Update
evm.model.tig00000361.64	No alias	(at3g04920 : 129.0) Ribosomal protein S24e family...	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000390	spliceosomal complex disassembly	IEP	Predicted GO
MF	GO:0003883	CTP synthase activity	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
CC	GO:0005681	spliceosomal complex	IEP	Predicted GO
CC	GO:0005684	U2-type spliceosomal complex	IEP	Predicted GO
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0007049	cell cycle	IEP	Predicted GO
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Predicted GO
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
CC	GO:0030684	preribosome	IEP	Predicted GO
CC	GO:0032040	small-subunit processome	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
BP	GO:0032988	ribonucleoprotein complex disassembly	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
CC	GO:0071008	U2-type post-mRNA release spliceosomal complex	IEP	Predicted GO
CC	GO:0071014	post-mRNA release spliceosomal complex	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001976	Ribosomal_S24e	26	103

External Links

No external refs found!

Solyc01g097870

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation