Pp1s167_18V6

Description : ribosomal protein l27

Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s167_18V6
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
A4A49_35915	No alias	50s ribosomal protein l27, chloroplastic	0.07	Orthogroups_2024-Update
Bradi2g59210	No alias	ribosomal protein large subunit 27	0.04	Orthogroups_2024-Update
Brara.D01107.1	No alias	component *(bL27c) of large plastid ribosomal-subunit proteome	0.03	Orthogroups_2024-Update
Cre06.g300800	No alias	ribosomal protein large subunit 27	0.09	Orthogroups_2024-Update
HORVU3Hr1G095330.1	No alias	component *(bL27c) of large plastid ribosomal-subunit proteome	0.03	Orthogroups_2024-Update
Kfl00287_0170	kfl00287_0170_v1.1	(p30155\|rk27_tobac : 140.0) 50S ribosomal protein L27,...	0.06	Orthogroups_2024-Update
LOC_Os01g69950	No alias	ribosomal protein L27, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00008674-RA	No alias	(p30155\|rk27_tobac : 196.0) 50S ribosomal protein L27,...	0.02	Orthogroups_2024-Update
Potri.001G329500	No alias	ribosomal protein large subunit 27	0.07	Orthogroups_2024-Update
Seita.5G433600.1	No alias	component *(bL27c) of large plastid ribosomal-subunit proteome	0.04	Orthogroups_2024-Update
Sobic.003G408000.2	No alias	component *(bL27c) of large plastid ribosomal-subunit proteome	0.02	Orthogroups_2024-Update
Solyc11g068820	No alias	50S ribosomal protein L27	0.06	Orthogroups_2024-Update
Sopen11g027540	No alias	Ribosomal L27 protein	0.07	Orthogroups_2024-Update
evm.model.tig00022075.47	No alias	(p30155\|rk27_tobac : 110.0) 50S ribosomal protein L27,...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Predicted GO
BP	GO:0006541	glutamine metabolic process	IEP	Predicted GO
BP	GO:0006542	glutamine biosynthetic process	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
MF	GO:0016211	ammonia ligase activity	IEP	Predicted GO
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001684	Ribosomal_L27	49	128

External Links

No external refs found!

Pp1s167_18V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation