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  5. Pp1s232_82V6

Pp1s232_82V6


Description : 50s ribosomal protein l18


Gene families : OG_42_0003571 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003571_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s232_82V6
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
143891 No alias Ribosomal L18p/L5e family protein 0.06 Orthogroups_2024-Update
A4A49_31170 No alias 50s ribosomal protein l18, chloroplastic 0.09 Orthogroups_2024-Update
Bradi1g03220 No alias Ribosomal L18p/L5e family protein 0.07 Orthogroups_2024-Update
Cre01.g052100 No alias Ribosomal L18p/L5e family protein 0.08 Orthogroups_2024-Update
GRMZM2G142097 No alias Ribosomal L18p/L5e family protein 0.03 Orthogroups_2024-Update
Glyma.09G077600 No alias Ribosomal L18p/L5e family protein 0.04 Orthogroups_2024-Update
Glyma.15G185000 No alias Ribosomal L18p/L5e family protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G115340.1 No alias component *(uL18c) of large plastid ribosomal-subunit proteome 0.14 Orthogroups_2024-Update
Kfl00404_0030 kfl00404_0030_v1.1 (q8say0|rk18_orysa : 122.0) 50S ribosomal protein L18,... 0.06 Orthogroups_2024-Update
MA_7609850g0010 No alias (at1g48350 : 124.0) Ribosomal L18p/L5e family protein;... 0.03 Orthogroups_2024-Update
Potri.010G005000 No alias Ribosomal L18p/L5e family protein 0.08 Orthogroups_2024-Update
Seita.9G022000.1 No alias component *(uL18c) of large plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Sobic.001G027600.1 No alias component *(uL18c) of large plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Solyc12g098890 No alias 50S ribosomal protein L18 (AHRD V3.3 *** W9QXJ8_9ROSA) 0.04 Orthogroups_2024-Update
Sopen12g033640 No alias Ribosomal L18p/L5e family 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 62 180
No external refs found!