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  5. Pp1s23_141V6

Pp1s23_141V6


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s23_141V6
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
76693 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
At2g21610 No alias Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] 0.02 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.03 Orthogroups_2024-Update
At3g29090 No alias Pectinesterase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ0] 0.02 Orthogroups_2024-Update
Brara.A02274.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.B00244.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.I00335.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J01617.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Brara.J02514.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.02 Orthogroups_2024-Update
Glyma.01G006800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G014500 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G075860.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
LOC_Os09g39760 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G364200 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.004G033700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G104800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G008100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G117100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G017700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G054700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G068400 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s215_36V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s67_6V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Sobic.003G231500.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
Sobic.008G131300.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc12g098340 No alias Pectinesterase (AHRD V3.3 *** K4DHK8_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 107 398
No external refs found!