Pp1s24_126V6

Description : ribosomal protein l24

Gene families : OG_42_0005677 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005677_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s24_126V6
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
230291	No alias	Translation protein SH3-like family protein	0.02	Orthogroups_2024-Update
A4A49_64410	No alias	50s ribosomal protein l24, chloroplastic	0.1	Orthogroups_2024-Update
Bradi1g33030	No alias	Translation protein SH3-like family protein	0.06	Orthogroups_2024-Update
Brara.B01369.1	No alias	component *(uL24c) of large plastid ribosomal-subunit proteome	0.03	Orthogroups_2024-Update
Brara.J00929.1	No alias	component *(uL24c) of large plastid ribosomal-subunit proteome	0.06	Orthogroups_2024-Update
Cre16.g652550	No alias	Translation protein SH3-like family protein	0.11	Orthogroups_2024-Update
Glyma.12G215900	No alias	Translation protein SH3-like family protein	0.02	Orthogroups_2024-Update
Glyma.13G285600	No alias	Translation protein SH3-like family protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G101810.1	No alias	component *(uL24c) of large plastid ribosomal-subunit proteome	0.13	Orthogroups_2024-Update
Kfl00086_0080	kfl00086_0080_v1.1	(at5g54600 : 178.0) Translation protein SH3-like family...	0.06	Orthogroups_2024-Update
Potri.001G415400	No alias	Translation protein SH3-like family protein	0.08	Orthogroups_2024-Update
Seita.4G255700.1	No alias	component *(uL24c) of large plastid ribosomal-subunit proteome	0.08	Orthogroups_2024-Update
Sobic.010G233800.1	No alias	component *(uL24c) of large plastid ribosomal-subunit proteome	0.13	Orthogroups_2024-Update
Solyc07g063960	No alias	50S ribosomal protein L24, chloroplastic (AHRD V3.3 ***...	0.05	Orthogroups_2024-Update
Sopen07g032100	No alias	KOW motif	0.12	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004827	proline-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Predicted GO
MF	GO:0008565	protein transporter activity	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	Predicted GO
BP	GO:0017007	protein-bilin linkage	IEP	Predicted GO
BP	GO:0017009	protein-phycocyanobilin linkage	IEP	Predicted GO
CC	GO:0019867	outer membrane	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005824	KOW	67	98
IPR003256	Ribosomal_L24	100	164

External Links

No external refs found!

Pp1s24_126V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation