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  5. Pp1s2_298V6

Pp1s2_298V6


Description : 40s ribosomal protein


Gene families : OG_42_0002664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002664_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s2_298V6
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
At5g04800 No alias 40S ribosomal protein S17-4... 0.02 Orthogroups_2024-Update
Bradi3g29060 No alias Ribosomal S17 family protein 0.02 Orthogroups_2024-Update
Brara.B00154.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Brara.C00178.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.J02711.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre12.g498250 No alias Ribosomal S17 family protein 0.11 Orthogroups_2024-Update
Glyma.07G219500 No alias Ribosomal S17 family protein 0.03 Orthogroups_2024-Update
Glyma.10G076400 No alias Ribosomal S17 family protein 0.04 Orthogroups_2024-Update
Glyma.20G017700 No alias Ribosomal S17 family protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G042220.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
LOC_Os03g01900 No alias 40S ribosomal protein S17, putative, expressed 0.01 Orthogroups_2024-Update
MA_184894g0010 No alias (at5g04800 : 212.0) Ribosomal S17 family protein;... 0.02 Orthogroups_2024-Update
Potri.010G241200 No alias Ribosomal S17 family protein 0.02 Orthogroups_2024-Update
Seita.9G218400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Seita.9G497100.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.010G076400.1 No alias component *(eS17) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Solyc05g055230 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.06 Orthogroups_2024-Update
Solyc11g006690 No alias 40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC) 0.04 Orthogroups_2024-Update
Sopen05g033670 No alias Ribosomal S17 0.02 Orthogroups_2024-Update
Sopen10g032640 No alias Ribosomal S17 0.05 Orthogroups_2024-Update
Sopen11g002620 No alias Ribosomal S17 0.05 Orthogroups_2024-Update
evm.model.contig_2507.2 No alias (at2g05220 : 160.0) Ribosomal S17 family protein;... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 1 119
No external refs found!