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  5. Pp1s314_26V6

Pp1s314_26V6


Description : vacuolar protein sorting-associated


Gene families : OG_42_0000864 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s314_26V6
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
82033 No alias pleckstrin homology (PH) domain-containing protein 0.04 Orthogroups_2024-Update
At1g48090 No alias calcium-dependent lipid-binding family protein... 0.03 Orthogroups_2024-Update
Bradi3g43345 No alias calcium-dependent lipid-binding family protein 0.06 Orthogroups_2024-Update
Brara.K01205.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00451_0090 kfl00451_0090_v1.1 (at1g48090 : 1719.0) calcium-dependent lipid-binding... 0.04 Orthogroups_2024-Update
MA_10437247g0010 No alias (at4g17140 : 1094.0) pleckstrin homology (PH)... 0.02 Orthogroups_2024-Update
Mp7g07580.2 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00039298-RA No alias (at1g48090 : 467.0) calcium-dependent lipid-binding... 0.02 Orthogroups_2024-Update
Potri.008G100600 No alias calcium-dependent lipid-binding family protein 0.03 Orthogroups_2024-Update
Seita.1G158900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
evm.model.tig00000042.91 No alias (at4g17140 : 114.0) pleckstrin homology (PH)... 0.03 Orthogroups_2024-Update
evm.model.tig00001343.3 No alias (at4g17140 : 125.0) pleckstrin homology (PH)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026854 VPS13_N 2 113
IPR031646 VPS13_N2 142 388
IPR009291 Vps62 4477 4567
IPR009291 Vps62 2313 2477
IPR009291 Vps62 2078 2228
IPR031642 VPS13_mid_rpt 597 832
IPR009543 SHR-BD 3388 3700
IPR031645 VPS13_C 3948 4094
No external refs found!