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  5. Pp1s319_37V6

Pp1s319_37V6


Description : ubiquitin-conjugating enzyme


Gene families : OG_42_0000236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s319_37V6
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Brara.A03550.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Brara.H01501.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Brara.I01283.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
GRMZM2G000601 No alias ubiquitin-conjugating enzyme 28 0.02 Orthogroups_2024-Update
GRMZM2G072506 No alias Ubiquitin-conjugating enzyme family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G002220.2 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
HORVU1Hr1G069530.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
HORVU3Hr1G080790.2 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
LOC_Os02g02830 No alias ubiquitin-conjugating enzyme, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g12230 No alias ubiquitin-conjugating enzyme, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G110200 No alias ubiquitin conjugating enzyme 8 0.03 Orthogroups_2024-Update
Potri.006G159800 No alias ubiquitin-conjugating enzyme 37 0.03 Orthogroups_2024-Update
Potri.016G138900 No alias ubiquitin conjugating enzyme 8 0.02 Orthogroups_2024-Update
Potri.019G131400 No alias ubiquitin conjugating enzyme 8 0.04 Orthogroups_2024-Update
Seita.4G164400.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Sobic.003G337000.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Sobic.006G257900.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Sobic.009G174900.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Solyc05g050230 No alias Ubiquitin conjugating enzyme E2 (AHRD V3.3 *** A5YVL3_ADICA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 9 149
No external refs found!