1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s341_24V6

Pp1s341_24V6


Description : ferredoxin (2fe-2s)


Gene families : OG_42_0000516 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s341_24V6
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
230918 No alias 2Fe-2S ferredoxin-like superfamily protein 0.04 Orthogroups_2024-Update
A4A49_22493 No alias ferredoxin-1, chloroplastic 0.02 Orthogroups_2024-Update
Bradi1g13200 No alias 2Fe-2S ferredoxin-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g09320 No alias ferredoxin 3 0.02 Orthogroups_2024-Update
Cre07.g334800 No alias 2Fe-2S ferredoxin-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.01G238000 No alias 2Fe-2S ferredoxin-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.08G126800 No alias 2Fe-2S ferredoxin-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G072880.2 No alias ferredoxin targeted to NADP reduction 0.03 Orthogroups_2024-Update
HORVU4Hr1G002520.1 No alias ferredoxin targeted to non-NADP reduction 0.02 Orthogroups_2024-Update
HORVU5Hr1G117910.3 No alias ferredoxin targeted to NADP reduction 0.02 Orthogroups_2024-Update
HORVU7Hr1G077740.1 No alias ferredoxin targeted to NADP reduction 0.04 Orthogroups_2024-Update
LOC_Os03g45710 No alias 2Fe-2S iron-sulfur cluster binding domain containing... 0.01 Orthogroups_2024-Update
MA_184421g0010 No alias (at4g14890 : 159.0) 2Fe-2S ferredoxin-like superfamily... 0.02 Orthogroups_2024-Update
Mp5g15920.1 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.01 Orthogroups_2024-Update
Potri.003G015200 No alias 2Fe-2S ferredoxin-like superfamily protein 0.01 Orthogroups_2024-Update
Potri.009G163800 No alias ferredoxin 3 0.02 Orthogroups_2024-Update
Pp1s146_120V6 No alias ferredoxin (2fe-2s) 0.02 Orthogroups_2024-Update
Pp1s65_120V6 No alias 2fe-2s ferredoxin 0.03 Orthogroups_2024-Update
Seita.6G005600.1 No alias ferredoxin targeted to NADP reduction 0.02 Orthogroups_2024-Update
Seita.6G005700.1 No alias ferredoxin targeted to NADP reduction 0.01 Orthogroups_2024-Update
Sopen11g027140 No alias 2Fe-2S iron-sulfur cluster binding domain 0.02 Orthogroups_2024-Update
evm.model.contig_672.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 70 142
No external refs found!