Description : syd atpase chromatin binding
Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s360_39V6 | |
Cluster | HCCA clusters: Cluster_198 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
177985 | No alias | chromatin remodeling factor CHD3 (PICKLE) | 0.02 | Orthogroups_2024-Update | |
440815 | No alias | chromatin remodeling 5 | 0.04 | Orthogroups_2024-Update | |
AC235535.1_FG001 | No alias | chromatin-remodeling protein 11 | 0.03 | Orthogroups_2024-Update | |
At3g06010 | No alias | Probable ATP-dependent DNA helicase CHR12... | 0.03 | Orthogroups_2024-Update | |
Bradi1g18910 | No alias | chromatin remodeling 5 | 0.02 | Orthogroups_2024-Update | |
Bradi1g26940 | No alias | chromatin remodeling 4 | 0.05 | Orthogroups_2024-Update | |
Bradi1g44177 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | Orthogroups_2024-Update | |
Bradi1g47367 | No alias | chromatin remodeling factor CHD3 (PICKLE) | 0.03 | Orthogroups_2024-Update | |
Brara.E00474.1 | No alias | chromatin remodeling factor *(ALC1) | 0.02 | Orthogroups_2024-Update | |
Cre07.g325700 | No alias | transcription regulatory protein SNF2, putative | 0.03 | Orthogroups_2024-Update | |
GRMZM2G010342 | No alias | chromatin remodeling 5 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G316191 | No alias | chromatin remodeling 4 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G387890 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | Orthogroups_2024-Update | |
Glyma.02G281000 | No alias | chromatin remodeling 5 | 0.02 | Orthogroups_2024-Update | |
Glyma.04G062400 | No alias | chromatin remodeling factor CHD3 (PICKLE) | 0.05 | Orthogroups_2024-Update | |
Glyma.05G131500 | No alias | chromatin remodeling 4 | 0.04 | Orthogroups_2024-Update | |
Glyma.07G252100 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | Orthogroups_2024-Update | |
Glyma.11G004100 | No alias | Homeotic gene regulator | 0.03 | Orthogroups_2024-Update | |
Glyma.15G097000 | No alias | chromatin remodeling factor17 | 0.04 | Orthogroups_2024-Update | |
Glyma.17G022300 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.05 | Orthogroups_2024-Update | |
Glyma.17G023600 | No alias | chromatin remodeling factor17 | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G041450.33 | No alias | SMARCA component *(SYD/BRM/MINU) | 0.05 | Orthogroups_2024-Update | |
Kfl00055_0090 | kfl00055_0090_v1.... | (q7g8y3|isw2_orysa : 1337.0) Probable chromatin... | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g27040 | No alias | chromatin-remodeling complex ATPase chain, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10429361g0010 | No alias | (at2g13370 : 1371.0) chromatin remodeling 5 (CHR5);... | 0.03 | Orthogroups_2024-Update | |
Mp3g15030.1 | No alias | chromatin remodeling factor (Iswi) | 0.02 | Orthogroups_2024-Update | |
Mp4g12200.1 | No alias | chromatin remodeling factor (DDM1) | 0.02 | Orthogroups_2024-Update | |
Mp5g06580.2 | No alias | chromatin remodeling factor (Snf2) | 0.05 | Orthogroups_2024-Update | |
Mp8g17660.1 | No alias | chromatin remodeling factor (Snf2) | 0.06 | Orthogroups_2024-Update | |
PSME_00000429-RA | No alias | (at2g28290 : 480.0) Encodes a SWI2/SNF2-like protein in... | 0.04 | Orthogroups_2024-Update | |
PSME_00001593-RA | No alias | (at2g13370 : 1311.0) chromatin remodeling 5 (CHR5);... | 0.02 | Orthogroups_2024-Update | |
PSME_00005765-RA | No alias | (q7g8y3|isw2_orysa : 1630.0) Probable chromatin... | 0.03 | Orthogroups_2024-Update | |
PSME_00006567-RA | No alias | (at5g44800 : 1157.0) chromatin remodeling 4 (CHR4);... | 0.03 | Orthogroups_2024-Update | |
PSME_00009909-RA | No alias | (at2g25170 : 296.0) Encodes a SWI/SWF nuclear-localized... | 0.03 | Orthogroups_2024-Update | |
PSME_00015826-RA | No alias | (at3g06010 : 472.0) Encodes AtCHR12, a SNF2/Brahma-type... | 0.03 | Orthogroups_2024-Update | |
Potri.003G110100 | No alias | chromatin remodeling 4 | 0.03 | Orthogroups_2024-Update | |
Potri.007G026700 | No alias | chromatin remodeling 1 | 0.03 | Orthogroups_2024-Update | |
Potri.014G056700 | No alias | SNF2 domain-containing protein / helicase... | 0.02 | Orthogroups_2024-Update | |
Seita.2G320900.1 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) | 0.05 | Orthogroups_2024-Update | |
Seita.4G112400.1 | No alias | SMARCA component *(SYD/BRM/MINU) | 0.08 | Orthogroups_2024-Update | |
Sobic.002G308700.1 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) | 0.02 | Orthogroups_2024-Update | |
Sobic.002G404700.1 | No alias | CHD1-type chromatin remodeling factor *(CHR5) &... | 0.02 | Orthogroups_2024-Update | |
Sobic.010G065300.1 | No alias | CHD3-type chromatin remodeling factor *(PKL/PKR) | 0.04 | Orthogroups_2024-Update | |
Solyc11g062010 | No alias | Chromatin structure-remodeling complex subunit snf21... | 0.02 | Orthogroups_2024-Update | |
Sopen06g024260 | No alias | SNF2 family N-terminal domain | 0.02 | Orthogroups_2024-Update | |
Sopen12g034530 | No alias | SNF2 family N-terminal domain | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2077.13 | No alias | (at2g13370 : 595.0) chromatin remodeling 5 (CHR5);... | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00000983.26 | No alias | (at2g13370 : 651.0) chromatin remodeling 5 (CHR5);... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
MF | GO:0042393 | histone binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
MF | GO:0005049 | nuclear export signal receptor activity | IEP | Predicted GO |
MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
BP | GO:0006479 | protein methylation | IEP | Predicted GO |
BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0008276 | protein methyltransferase activity | IEP | Predicted GO |
MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Predicted GO |
MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016571 | histone methylation | IEP | Predicted GO |
BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Predicted GO |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0033365 | protein localization to organelle | IEP | Predicted GO |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
MF | GO:0042054 | histone methyltransferase activity | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
BP | GO:0043543 | protein acylation | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
No external refs found! |