Pp1s65_100V6

Description : atp-binding cassette

Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s65_100V6
Cluster	HCCA clusters: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g36410	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Bradi3g16130	No alias	ATP-binding cassette 14	0.02	Orthogroups_2024-Update
Bradi4g24120	No alias	ATP-binding casette family G25	0.02	Orthogroups_2024-Update
Brara.B00211.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Brara.B01985.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Brara.F03336.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Cre17.g743547	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
GRMZM2G109527	No alias	ATP-binding casette family G25	0.03	Orthogroups_2024-Update
Glyma.01G154400	No alias	ATP-binding cassette 14	0.03	Orthogroups_2024-Update
Glyma.10G205600	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Glyma.13G279800	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Glyma.16G110100	No alias	ATP-binding cassette 14	0.03	Orthogroups_2024-Update
Glyma.20G174800	No alias	ATP-binding casette family G25	0.03	Orthogroups_2024-Update
Kfl00050_0290	kfl00050_0290_v1.1	(at5g06530 : 526.0) ABC-2 type transporter family...	0.02	Orthogroups_2024-Update
Mp6g05900.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
PSME_00019170-RA	No alias	(at5g06530 : 722.0) ABC-2 type transporter family...	0.02	Orthogroups_2024-Update
PSME_00034795-RA	No alias	(at3g13220 : 829.0) Encodes a ATP-binding cassette...	0.02	Orthogroups_2024-Update
Potri.006G199500	No alias	ABC-2 type transporter family protein	0.04	Orthogroups_2024-Update
Sobic.001G499100.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sopen11g009680	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update
evm.model.contig_2112.2	No alias	(at5g06530 : 343.0) ABC-2 type transporter family...	0.02	Orthogroups_2024-Update
evm.model.tig00020614.26	No alias	(at4g27420 : 244.0) ABC-2 type transporter family...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005543	phospholipid binding	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
CC	GO:0005787	signal peptidase complex	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006465	signal peptide processing	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
MF	GO:0035091	phosphatidylinositol binding	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
CC	GO:1905368	peptidase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	440	647
IPR003439	ABC_transporter-like	122	273

External Links

No external refs found!

Pp1s65_100V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation