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  5. Pp1s74_226V6

Pp1s74_226V6


Description : MVA3.3; plastid-specific ribosomal protein 6 precursor (Psrp-6) - like [Arabidopsis thaliana]


Gene families : OG_42_0009107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s74_226V6
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Brara.J01773.1 No alias component *(cL38) of large plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Glyma.06G089700 No alias plastid-specific 50S ribosomal protein 6 0.04 Orthogroups_2024-Update
HORVU7Hr1G055890.1 No alias component *(cL38) of large plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Kfl00714_0010 kfl00714_0010_v1.1 no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
LOC_Os11g34940 No alias plastid-specific 50S ribosomal protein 6, chloroplast... 0.03 Orthogroups_2024-Update
Mp4g21280.1 No alias component psPSRP6 of large ribosomal subunit proteome 0.02 Orthogroups_2024-Update
Seita.8G148900.1 No alias component *(cL38) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Sobic.003G246600.1 No alias component *(cL38) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sopen04g030750 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
CC GO:0009507 chloroplast IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
InterPro domains Description Start Stop
IPR020526 Ribosomal_L6_chp 30 85
No external refs found!