1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s78_98V6

Pp1s78_98V6


Description : early-responsive to dehydrationexpressed


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s78_98V6
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At3g54510 No alias Hyperosmolality-gated Ca2+ permeable channel 2.5... 0.03 Orthogroups_2024-Update
Brara.H00805.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.03 Orthogroups_2024-Update
HORVU5Hr1G001670.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Potri.008G091200 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Orthogroups_2024-Update
Solyc02g036260 No alias ERD (early-responsive to dehydration stress) family... 0.02 Orthogroups_2024-Update
Sopen02g032990 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032880 Csc1_N 6 175
IPR003864 RSN1_7TM 368 638
IPR027815 PHM7_cyt 197 357
No external refs found!