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- evm.model.contig_2288.5
evm.model.contig_2288.5
Description : (at4g11380 : 411.0) Adaptin family protein; FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain (InterPro:IPR008152), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain (InterPro:IPR013037), Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain (InterPro:IPR015151), Beta2-adaptin/TATA-box binding, C-terminal (InterPro:IPR012295), Armadillo-type fold (InterPro:IPR016024), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Adaptor protein complex, beta subunit (InterPro:IPR016342), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: Adaptin family protein (TAIR:AT4G23460.1). & (reliability: 822.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Porphyridium release: evm.model.contig_2288.5 | |
| Cluster | HCCA clusters: Cluster_19 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| Cre11.g478156 | No alias | Adaptin family protein | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00020592.38 | No alias | (at4g11380 : 730.0) Adaptin family protein; FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| CC | GO:0005575 | cellular_component | None | Extended |
| BP | GO:0006810 | transport | None | Extended |
| BP | GO:0006886 | intracellular protein transport | IEA | InterProScan predictions |
| BP | GO:0008104 | protein localization | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0015031 | protein transport | None | Extended |
| BP | GO:0015833 | peptide transport | None | Extended |
| BP | GO:0016192 | vesicle-mediated transport | IEA | InterProScan predictions |
| CC | GO:0030117 | membrane coat | IEA | InterProScan predictions |
| CC | GO:0032991 | protein-containing complex | None | Extended |
| BP | GO:0033036 | macromolecule localization | None | Extended |
| BP | GO:0042886 | amide transport | None | Extended |
| CC | GO:0044424 | intracellular part | None | Extended |
| CC | GO:0044425 | membrane part | None | Extended |
| CC | GO:0044444 | cytoplasmic part | None | Extended |
| CC | GO:0044464 | cell part | None | Extended |
| BP | GO:0045184 | establishment of protein localization | None | Extended |
| BP | GO:0046907 | intracellular transport | None | Extended |
| BP | GO:0051179 | localization | None | Extended |
| BP | GO:0051234 | establishment of localization | None | Extended |
| BP | GO:0051641 | cellular localization | None | Extended |
| BP | GO:0051649 | establishment of localization in cell | None | Extended |
| BP | GO:0071702 | organic substance transport | None | Extended |
| BP | GO:0071705 | nitrogen compound transport | None | Extended |
| CC | GO:0098796 | membrane protein complex | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0004143 | diacylglycerol kinase activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| CC | GO:0005622 | intracellular | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | Predicted GO |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
| BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
| BP | GO:0022406 | membrane docking | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
| BP | GO:0051640 | organelle localization | IEP | Predicted GO |
| BP | GO:0140029 | exocytic process | IEP | Predicted GO |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR002553 | Clathrin/coatomer_adapt-like_N | 33 | 558 |
