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evm.model.contig_2291.2


Description : (at3g03180 : 117.0) Got1/Sft2-like vescicle transport protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport protein, Got1/SFT2-like (InterPro:IPR007305); BEST Arabidopsis thaliana protein match is: Got1/Sft2-like vescicle transport protein family (TAIR:AT5G01430.2); Has 449 Blast hits to 449 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 113; Plants - 94; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)


Gene families : OG_42_0001902 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_2291.2
Cluster HCCA clusters: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
143332 No alias Got1/Sft2-like vescicle transport protein family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007305 Vesicle_transpt_Got1/SFT2 2 95
No external refs found!