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  5. evm.model.contig_3384.4

evm.model.contig_3384.4


Description : (at5g08740 : 189.0) NAD(P)H dehydrogenase C1 (NDC1); FUNCTIONS IN: NADH dehydrogenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to mitochondrial inner membrane, cell wall, chloroplast, plastoglobule; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: alternative NAD(P)H dehydrogenase 2 (TAIR:AT2G29990.1); Has 10792 Blast hits to 10785 proteins in 2211 species: Archae - 358; Bacteria - 8162; Metazoa - 316; Fungi - 520; Plants - 321; Viruses - 0; Other Eukaryotes - 1115 (source: NCBI BLink). & (reliability: 378.0) & (original description: no original description)


Gene families : OG_42_0006031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006031_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3384.4
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Brara.J02402.1 No alias NAD(P)H dehydrogenase *(NDC) & NAD(P)H dehydrogenase *(NDC) 0.02 Orthogroups_2024-Update
PSME_00020101-RA No alias (at5g08740 : 82.8) NAD(P)H dehydrogenase C1 (NDC1);... 0.02 Orthogroups_2024-Update
evm.model.tig00020660.34 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR023753 FAD/NAD-binding_dom 9 298
No external refs found!