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Description : no hits & (original description: no original description)
Gene families : OG_42_0001862 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001862_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Porphyridium release: evm.model.contig_3606.3 | |
| Cluster | HCCA clusters: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM5G856434 | No alias | Sas10/Utp3/C1D family | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g01510 | No alias | sas10/Utp3 family protein, expressed | 0.01 | Orthogroups_2024-Update | |
| Sobic.003G397700.1 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
| Solyc04g076560 | No alias | Sas10/Utp3/C1D (AHRD V3.3 *** A0A103YDJ6_CYNCS) | 0.01 | Orthogroups_2024-Update | |
| evm.model.tig00022075.45 | No alias | (at2g43650 : 99.0) EMBRYO DEFECTIVE 2777 (EMB2777);... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0005216 | ion channel activity | IEP | Predicted GO |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006996 | organelle organization | IEP | Predicted GO |
| MF | GO:0008897 | holo-[acyl-carrier-protein] synthase activity | IEP | Predicted GO |
| MF | GO:0015267 | channel activity | IEP | Predicted GO |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
| MF | GO:0016987 | sigma factor activity | IEP | Predicted GO |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
| MF | GO:0022836 | gated channel activity | IEP | Predicted GO |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Predicted GO |
| MF | GO:0022839 | ion gated channel activity | IEP | Predicted GO |
| CC | GO:0030915 | Smc5-Smc6 complex | IEP | Predicted GO |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| CC | GO:0106068 | SUMO ligase complex | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018972 | Sas10_C_dom | 515 | 587 |
| No external refs found! |