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  5. evm.model.contig_3643.2

evm.model.contig_3643.2


Description : no hits & (original description: no original description)


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_3643.2
Cluster HCCA clusters: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
At5g52480 No alias Nodulin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FHB4] 0.02 Orthogroups_2024-Update
Bradi4g04740 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.C02582.1 No alias regulatory protein *(FBW2) of RNA-induced silencing... 0.02 Orthogroups_2024-Update
GRMZM2G172904 No alias RNI-like superfamily protein 0.01 Orthogroups_2024-Update
HORVU6Hr1G077730.1 No alias regulatory protein *(FBW2) of RNA-induced silencing... 0.02 Orthogroups_2024-Update
Potri.001G373900 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.007G070500.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.007G070900.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc01g088240 No alias F-box FBW2-like protein (AHRD V3.3 *-* A0A0B0NRC7_GOSAR) 0.01 Orthogroups_2024-Update
Solyc08g013810 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005892 acetylcholine-gated channel complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
CC GO:0034702 ion channel complex IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0043235 receptor complex IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:0098802 plasma membrane receptor complex IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 271 293
IPR001810 F-box_dom 76 121
No external refs found!