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  5. evm.model.contig_4446.20

evm.model.contig_4446.20


Description : (at3g11450 : 217.0) DnaJ domain ;Myb-like DNA-binding domain; FUNCTIONS IN: heat shock protein binding, DNA binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), MYB-like (InterPro:IPR017877), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778); BEST Arabidopsis thaliana protein match is: DnaJ domain ;Myb-like DNA-binding domain (TAIR:AT5G06110.2); Has 60375 Blast hits to 43868 proteins in 3410 species: Archae - 228; Bacteria - 14410; Metazoa - 19184; Fungi - 5541; Plants - 3499; Viruses - 192; Other Eukaryotes - 17321 (source: NCBI BLink). & (reliability: 434.0) & (original description: no original description)


Gene families : OG_42_0004317 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4446.20
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
At5g06110 No alias Cell division related protein-like... 0.01 Orthogroups_2024-Update
Brara.K00311.1 No alias Hsp40-chaperone ZRF ribosome-associated chaperone complex 0.03 Orthogroups_2024-Update
Cre01.g003376 No alias DnaJ domain ;Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Kfl00706_0060 kfl00706_0060_v1.1 (at5g06110 : 273.0) DnaJ domain ;Myb-like DNA-binding... 0.03 Orthogroups_2024-Update
Potri.003G190000 No alias DnaJ domain ;Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Pp1s150_13V6 No alias gonidia forming protein 0.04 Orthogroups_2024-Update
Pp1s344_48V6 No alias m-phase phosphoprotein 11 0.04 Orthogroups_2024-Update
Solyc01g096700 No alias DnaJ domain-containing protein (AHRD V3.3 *** A0A118JUX9_CYNCS) 0.02 Orthogroups_2024-Update
Sopen01g040410 No alias DnaJ domain 0.02 Orthogroups_2024-Update
evm.model.tig00001542.8 No alias (at3g11450 : 156.0) DnaJ domain ;Myb-like DNA-binding... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 346 388
IPR001623 DnaJ_domain 1 43
No external refs found!