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  5. evm.model.contig_4477.11

evm.model.contig_4477.11


Description : (at4g24820 : 322.0) 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), 26S proteasome, regulatory subunit Rpn7 (InterPro:IPR019585); BEST Arabidopsis thaliana protein match is: 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (TAIR:AT3G61140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8w425|psmd6_orysa : 309.0) 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) - Oryza sativa (Rice) & (reliability: 644.0) & (original description: no original description)


Gene families : OG_42_0003888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003888_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4477.11
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cre13.g581450 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.02 Orthogroups_2024-Update
Mp1g10100.1 No alias regulatory component RPN7 of 26S proteasome 0.03 Orthogroups_2024-Update
Seita.7G143500.1 No alias regulatory component *(RPN7) of 26S proteasome 0.02 Orthogroups_2024-Update
Sobic.004G204800.2 No alias regulatory component *(RPN7) of 26S proteasome 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0015109 chromate transmembrane transporter activity IEP Predicted GO
BP GO:0015703 chromate transport IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
InterPro domains Description Start Stop
IPR019585 Rpn7/CSN1 58 231
IPR000717 PCI_dom 249 347
No external refs found!