Coexpression cluster: Cluster_20 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006486 protein glycosylation 3.19% (6/188) 3.3 2.4e-05 0.003397
GO:0043413 macromolecule glycosylation 3.19% (6/188) 3.3 2.4e-05 0.003397
GO:0070085 glycosylation 3.19% (6/188) 3.3 2.4e-05 0.003397
GO:0030126 COPI vesicle coat 1.6% (3/188) 5.06 4.4e-05 0.004699
GO:0051641 cellular localization 4.26% (8/188) 2.54 6e-05 0.005121
GO:0051649 establishment of localization in cell 3.72% (7/188) 2.5 0.000213 0.011323
GO:0046907 intracellular transport 3.72% (7/188) 2.5 0.000213 0.011323
GO:0044431 Golgi apparatus part 2.13% (4/188) 3.67 0.000208 0.014788
GO:0033036 macromolecule localization 3.72% (7/188) 2.37 0.000368 0.015682
GO:0008104 protein localization 3.72% (7/188) 2.37 0.000368 0.015682
GO:0006886 intracellular protein transport 3.19% (6/188) 2.6 0.000415 0.016082
GO:0030117 membrane coat 2.13% (4/188) 3.3 0.000593 0.021062
GO:0018193 peptidyl-amino acid modification 2.13% (4/188) 3.15 0.000907 0.027595
GO:0071705 nitrogen compound transport 3.72% (7/188) 2.17 0.000868 0.02843
GO:0015031 protein transport 3.19% (6/188) 2.18 0.002006 0.038843
GO:0045184 establishment of protein localization 3.19% (6/188) 2.18 0.002006 0.038843
GO:0042886 amide transport 3.19% (6/188) 2.18 0.002006 0.038843
GO:0015833 peptide transport 3.19% (6/188) 2.18 0.002006 0.038843
GO:0000413 protein peptidyl-prolyl isomerization 1.6% (3/188) 3.6 0.001619 0.040577
GO:0030120 vesicle coat 1.6% (3/188) 3.6 0.001619 0.040577
GO:0018208 peptidyl-proline modification 1.6% (3/188) 3.6 0.001619 0.040577
GO:0044444 cytoplasmic part 5.85% (11/188) 1.46 0.002222 0.041147
GO:0071702 organic substance transport 3.72% (7/188) 2.0 0.001793 0.042435
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA clusters Cluster_21 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_83 0.02 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_15 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_20 0.028 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_32 0.025 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_113 0.031 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_2 0.024 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_82 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_177 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_184 0.028 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_187 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_116 0.019 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_99 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_112 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_255 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_154 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_497 0.022 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_77 0.023 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_97 0.024 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_158 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_94 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_252 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_135 0.032 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_30 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_89 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_100 0.026 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_230 0.022 Orthogroups_2024-Update Compare
Sequences (188) (download table)

InterPro Domains

GO Terms

Family Terms