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  5. evm.model.contig_448.21

evm.model.contig_448.21


Description : (at1g23280 : 221.0) MAK16 protein-related; CONTAINS InterPro DOMAIN/s: Mak16 protein (InterPro:IPR006958); Has 4868 Blast hits to 3538 proteins in 334 species: Archae - 9; Bacteria - 248; Metazoa - 1831; Fungi - 653; Plants - 272; Viruses - 128; Other Eukaryotes - 1727 (source: NCBI BLink). & (reliability: 442.0) & (original description: no original description)


Gene families : OG_42_0004708 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_448.21
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
A4A49_13338 No alias hypothetical protein 0.01 Orthogroups_2024-Update
At1g23280 No alias Protein MAK16 homolog [Source:UniProtKB/TrEMBL;Acc:F4I4Q1] 0.03 Orthogroups_2024-Update
Bradi2g14350 No alias MAK16 protein-related 0.05 Orthogroups_2024-Update
Brara.G02435.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre02.g145231 No alias MAK16 protein-related 0.03 Orthogroups_2024-Update
Potri.012G085300 No alias MAK16 protein-related 0.04 Orthogroups_2024-Update
Pp1s7_209V6 No alias mak16-like protein rbm13 0.03 Orthogroups_2024-Update
Seita.1G148400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G407600.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sopen01g001810 No alias Ribosomal L28e protein family 0.02 Orthogroups_2024-Update
evm.model.tig00000144.191 No alias (at1g23280 : 218.0) MAK16 protein-related; CONTAINS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0031418 L-ascorbic acid binding IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006958 Mak16 137 230
IPR029004 L28e/Mak16 6 118
No external refs found!