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evm.model.contig_4505.4


Description : (at1g50590 : 117.0) RmlC-like cupins superfamily protein; CONTAINS InterPro DOMAIN/s: Pirin, C-terminal (InterPro:IPR008778), Pirin (InterPro:IPR012093), Cupin, RmlC-type (InterPro:IPR011051), Pirin, N-terminal (InterPro:IPR003829); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT2G43120.1); Has 7420 Blast hits to 7420 proteins in 1472 species: Archae - 66; Bacteria - 4684; Metazoa - 72; Fungi - 219; Plants - 125; Viruses - 0; Other Eukaryotes - 2254 (source: NCBI BLink). & (reliability: 234.0) & (original description: no original description)


Gene families : OG_42_0001449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001449_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_4505.4
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G361100 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G015100.4 No alias transcriptional co-regulator *(Pirin) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003829 Pirin_N_dom 68 162
IPR008778 Pirin_C_dom 223 336
No external refs found!