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evm.model.contig_456.1


Description : (at2g33040 : 140.0) gamma subunit of Mt ATP synthase (ATP3); FUNCTIONS IN: zinc ion binding; INVOLVED IN: proton transport, ATP synthesis coupled proton transport; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 9548 Blast hits to 9546 proteins in 2754 species: Archae - 5; Bacteria - 5621; Metazoa - 285; Fungi - 151; Plants - 166; Viruses - 0; Other Eukaryotes - 3320 (source: NCBI BLink). & (p26360|atpg3_ipoba : 139.0) ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14) - Ipomoea batatas (Sweet potato) (Batate) & (reliability: 280.0) & (original description: no original description)


Gene families : OG_42_0004008 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Porphyridium release: evm.model.contig_456.1
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
At2g33040 No alias ATP synthase subunit gamma, mitochondrial... 0.02 Orthogroups_2024-Update
Brara.E01088.1 No alias subunit gamma of ATP synthase peripheral MF1 subcomplex 0.01 Orthogroups_2024-Update
Sobic.001G457000.1 No alias subunit gamma of ATP synthase peripheral MF1 subcomplex 0.02 Orthogroups_2024-Update
evm.model.tig00001042.12 No alias (at2g33040 : 186.0) gamma subunit of Mt ATP synthase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015986 ATP synthesis coupled proton transport IEA InterProScan predictions
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEA InterProScan predictions
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004557 alpha-galactosidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018196 peptidyl-asparagine modification IEP Predicted GO
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000131 ATP_synth_F1_gsu 1 271
No external refs found!