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  5. 230720

230720


Description : Translation elongation factor EF1A/initiation factor IF2gamma family protein


Gene families : OG_42_0004109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 230720
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
At5g10630 No alias Translation elongation factor EF1A/initiation factor... 0.02 Orthogroups_2024-Update
Brara.C00431.1 No alias associated EXO9 interaction GTPase *(SKI7) & GTPase... 0.03 Orthogroups_2024-Update
HORVU2Hr1G102800.6 No alias GTPase component *(HBS1/SPL33/SKI7) of DOM34-HBS1... 0.02 Orthogroups_2024-Update
Sopen12g016940 No alias Elongation factor Tu GTP binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 194 416
IPR004160 Transl_elong_EFTu/EF1A_C 520 624
No external refs found!