- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_42_0165549 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Selaginella: 448813 | |
| Cluster | HCCA clusters: Cluster_117 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Predicted GO |
| MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006739 | NADP metabolic process | IEP | Predicted GO |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0010038 | response to metal ion | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| BP | GO:0016485 | protein processing | IEP | Predicted GO |
| BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
| CC | GO:0030677 | ribonuclease P complex | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
| BP | GO:0042221 | response to chemical | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| MF | GO:0050661 | NADP binding | IEP | Predicted GO |
| BP | GO:0051604 | protein maturation | IEP | Predicted GO |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| CC | GO:1902555 | endoribonuclease complex | IEP | Predicted GO |
| CC | GO:1905348 | endonuclease complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 43 | 107 |
| No external refs found! |