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  5. 6364

6364


Description : Ribosomal L5P family protein


Gene families : OG_42_0007175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 6364
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
A4A49_10471 No alias 50s ribosomal protein l5, chloroplastic 0.06 Orthogroups_2024-Update
Bradi1g76880 No alias Ribosomal L5P family protein 0.07 Orthogroups_2024-Update
Brara.I00052.1 No alias component *(uL5c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
GRMZM2G119471 No alias Ribosomal L5P family protein 0.03 Orthogroups_2024-Update
Glyma.09G255500 No alias Ribosomal L5P family protein 0.03 Orthogroups_2024-Update
Glyma.18G237400 No alias Ribosomal L5P family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G084410.1 No alias component *(uL5c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
MA_86404g0010 No alias (p82192|rk5_spiol : 154.0) 50S ribosomal protein L5,... 0.03 Orthogroups_2024-Update
Mp1g19970.1 No alias component psRPL5 of large ribosomal subunit proteome 0.02 Orthogroups_2024-Update
Potri.002G154600 No alias Ribosomal L5P family protein 0.04 Orthogroups_2024-Update
Potri.014G089100 No alias Ribosomal L5P family protein 0.02 Orthogroups_2024-Update
Pp1s21_61V6 No alias ribosomal protein l5 0.02 Orthogroups_2024-Update
Pp1s358_49V6 No alias 50s ribosomal protein l5 0.03 Orthogroups_2024-Update
Seita.9G559300.1 No alias component *(uL5c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Solyc09g007560 No alias 50S ribosomal protein L5 (AHRD V3.3 *** B5TV71_CAMSI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR031309 Ribosomal_L5_C 85 178
IPR031310 Ribosomal_L5_N 25 81
No external refs found!